EGAF00005724826 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005724826
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9492153
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	29117	0.3067481107816109	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	19674	0.2072659385073123	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	19406	0.204442553759932	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	17940	0.1889982177910533	No Hit
GCAAGTGAGTGGTACAAGAGTGCAGACTCACAGTTTAAATTATTCTCTTA	16223	0.17090959237593412	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	14140	0.1489651504774523	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	13836	0.1457625050923642	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	13416	0.14133779765243987	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	12048	0.1269258934195435	No Hit
AACCTGCACGTTTTAATGGAGTAACCGCTATATCCAGGCACATTCCATGA	10716	0.1128932498243549	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	10270	0.10819463192386385	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTTAGCG	340	90.047585	1
CGATCGT	340	87.816	145
ACCCGTT	765	86.34057	7
TTACGCG	550	73.359055	6
GCTAGCC	3570	71.141495	1
CGAACGT	370	69.58222	1
GTGGTAC	6125	64.70257	9
CGCGATA	535	63.67882	7
GCGGATA	715	63.545784	145
CGTCGAC	790	63.36627	8
AGTACCC	8145	63.20174	2
ACCCATA	8195	62.64636	5
CGCACTA	670	61.2739	1
ACGCGTA	430	60.37905	145
CTAGGAT	4640	59.59178	145
GTTCGCG	525	58.30178	3
CCCATAA	9350	57.809315	6
CGCGTTC	615	57.687737	5
TCGTGTT	2890	56.806793	4
CGCCGTA	505	56.44756	7