EGAF00005724828 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005724828
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5907800
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	15611	0.26424388097091983	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	9842	0.1665933173093199	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	9154	0.1549476962659535	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	8903	0.15069907579809744	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	8485	0.14362368394326147	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	8379	0.14182944581739396	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	7460	0.12627373980161818	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	7252	0.12275297064897255	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	6182	0.10464132164257423	No Hit
GCAAGTGAGTGGTACAAGAGTGCAGACTCACAGTTTAAATTATTCTCTTA	6174	0.10450590744439554	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGATCGT	200	102.73945	145
ACCCGTT	460	99.7247	7
GTTAGCG	220	96.25412	1
GTTCGCG	375	84.70075	3
TTACGCG	335	82.17585	6
CGCCGTA	455	79.10537	7
GCTAGCC	2080	73.30121	1
CGTCGAC	650	72.74715	8
TCGTGTT	1865	71.53073	4
AGCGTGA	1280	68.93257	6
CGCGATA	635	68.90729	7
TCGCGCT	470	67.58267	5
TTCGCGC	480	66.17303	4
GCGGATA	350	65.61511	145
AACCGAC	410	65.41153	9
CTTTCGT	2040	64.704155	1
CCGACGT	795	63.92726	5
CGGCGAT	325	60.81131	2
CGATTAG	285	59.44114	1
AACGATT	955	59.12092	9