EGAF00005724834 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005724834
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7278918
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	14217	0.19531749086883518	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	13611	0.18699207766868647	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	10503	0.14429342383030005	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	9426	0.1294972686874615	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	9306	0.12784867201416475	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	8118	0.1115275649485267	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	7952	0.10924700621713283	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	7314	0.10048196723743831	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTTAGCG	325	105.47273	1
ACCCGTT	555	88.15208	7
TTACGCG	365	88.140594	6
CGCGATA	475	85.34182	7
CGTCGAC	790	74.315544	8
CCGATAC	1035	74.28135	8
GTTCGCG	390	71.73093	3
AACGATT	1275	71.262436	9
CCGCGTT	355	70.92317	4
CGAACGT	295	68.7707	1
TCGTGTT	2355	68.304756	4
GCTAGCC	2480	67.41766	1
TCCGATA	1190	65.19338	7
AGCGTGA	1640	63.540913	6
CGCGCTT	410	61.368587	9
CGGCGAT	380	58.895264	2
CTTTCGT	2815	57.65501	1
GCGTGAT	1820	57.219276	7
CGCGTTC	445	56.578773	5
CCCATAA	5730	56.145405	6