EGAF00005724836 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005724836
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6916791
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	15109	0.21843944684753375	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	14392	0.20807336812692476	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	10451	0.1510960790921686	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	9073	0.13117354565144443	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	8670	0.12534714436217603	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	8503	0.12293272993213183	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	8451	0.12218093621738753	No Hit
GCAAGTGAGTGGTACAAGAGTGCAGACTCACAGTTTAAATTATTCTCTTA	7789	0.11261002392583498	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTTAGCG	250	100.93102	1
CGATCGT	205	96.246315	145
ACGCGTA	235	89.20702	145
TTACGCG	480	83.22944	6
CGTCGAC	845	80.437965	8
ACCCGTT	460	79.211525	7
CGCGTTC	475	75.25232	5
CGCGCTT	445	70.85957	9
CGAACGT	190	70.090996	1
ACGCGCC	600	66.568634	8
TCGTGTT	2580	65.46928	4
CGATTAG	300	65.41826	1
CCGCGTT	555	64.40468	4
CTTTCGT	2605	64.03706	1
CTAGTCG	1300	63.617832	3
CTAACGG	885	61.77198	4
TCTAACG	915	59.74667	3
ACGTGCG	920	58.97702	145
GCTAGCC	2275	57.921345	1
GTCGACC	1190	57.70655	9