EGAF00005724846 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005724846
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7229174
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	15122	0.2091801912638982	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	13174	0.1822338209040203	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	10928	0.15116526452399678	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	10245	0.141717435491247	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	8740	0.12089901280561237	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	8671	0.11994454691504175	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	8596	0.11890708399050846	No Hit
CTGATTGATGTTTAGCTCTAGACTAAGTTGCTTTCAAGTGATAACTGTCT	7965	0.11017856258543507	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCCGTT	790	112.567215	7
GTTAGCG	270	96.73921	1
ACGCGTA	330	90.40136	145
CGCCGTA	470	75.082825	7
CGTCGAC	495	74.14291	8
GCTAGCC	2445	73.6251	1
TCGTGTT	2820	71.091194	4
CGAACGT	310	70.593475	1
TCGCGCT	325	67.33252	5
GTTCGCG	350	64.53948	3
GCGATTA	275	64.173676	6
CGATCGT	245	63.317852	145
CTTTCGT	3150	63.197975	1
CCGCGTT	305	62.489994	4
GTACCCG	1405	62.300556	5
CGATTAG	290	58.42219	1
TTCGTGT	3485	57.120224	3
CCCATAA	5740	57.063137	6
CGTATCG	610	56.730553	145
TTACGCG	265	55.940067	6