EGAF00005724852 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005724852
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8352563
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	20803	0.24906127616158058	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	15642	0.18727185894916326	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	12275	0.14696087895416055	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	11868	0.14208812313058877	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	9802	0.11735320044877244	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	9488	0.11359387531707334	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	9344	0.11186985360062535	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	9320	0.111582516647884	No Hit
CTGATTGATGTTTAGCTCTAGACTAAGTTGCTTTCAAGTGATAACTGTCT	8366	0.10016087277641605	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTTAGCG	250	111.15672	1
TTACGCG	320	93.35261	6
ACCCGTT	585	91.42059	7
ACGCGTA	430	91.137245	145
GCTAGCC	3185	87.686424	1
GTTCGCG	485	80.211395	3
CGATCGT	350	70.91346	145
TTCGCGC	590	65.93767	4
CGAACGT	375	64.84143	1
CTTTCGT	2925	62.46628	1
TCGTGTT	2990	61.338093	4
TCGCGCT	630	60.64954	5
CGGCGAT	380	60.32781	2
CGATTAG	530	60.29728	1
CGTCGAC	605	59.69799	8
CGCCGTA	400	59.037518	7
CCCATAA	6905	57.649944	6
AGTACCC	6410	57.222004	2
CTAGGAT	3770	55.439808	145
ACCCATA	6790	54.021862	5