EGAF00005724858 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005724858
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7505546
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	15440	0.20571454761585634	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	13412	0.1786945280196804	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	11014	0.14674482043011927	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	9736	0.12971741163134567	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	9214	0.12276255451635365	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	8903	0.11861895190569748	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	8376	0.11159747738538942	No Hit
CTGATTGATGTTTAGCTCTAGACTAAGTTGCTTTCAAGTGATAACTGTCT	8289	0.11043833453289074	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	7828	0.1042962097627541	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCCGTT	835	111.23628	7
GTTAGCG	255	109.563934	1
TTACGCG	405	87.956085	6
GTTCGCG	365	80.36816	3
ACGCGTA	330	79.90956	145
CGCCGTA	385	72.557205	7
GCTAGCC	2235	71.25333	1
CGTCGAC	645	64.96401	8
CGATTAG	370	64.18374	1
CGGTTCG	170	63.664314	140-144
GCGATTA	285	61.26972	6
TCGTGTT	2705	59.646347	4
TTCGCGC	495	59.262947	4
CCCATAA	6090	56.42851	6
CTTTCGT	2880	56.26565	1
TCGCGCT	525	55.87761	5
AGCGTGA	1595	55.615234	6
CGCGCTT	490	55.584003	9
CGAACGT	330	55.03098	1
GTACCCG	1740	53.38881	5