EGAF00005724886 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005724886
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6629146
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	13390	0.20198680191988533	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	11528	0.17389871938255697	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	8492	0.1281009650413492	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	7921	0.11948748752855949	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	7790	0.11751136571739407	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	7730	0.11660627175808166	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	7543	0.11378539558489134	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	7265	0.1095917935734105	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	7213	0.1088073788086731	No Hit
CGCAATGACCCCGCACGATTTCATTGAACACTTCCTCTCCAAAATGCCAG	6777	0.10223036270433628	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCCGTT	680	91.94069	7
GTTAGCG	185	75.17015	1
TCGTGTT	2005	74.1878	4
CGTCGAC	610	71.74388	8
AGGTTCG	880	69.50825	5
ACGCGTA	335	69.48163	145
CGCGATA	375	68.54008	7
CGCACTA	525	67.545746	1
AGCGTGA	1560	66.38928	6
CGCCGTA	430	66.235306	7
CGAACGT	290	64.737045	1
CGCGCTT	405	63.46303	9
TTACGCG	305	61.531887	6
GGTTCGA	1020	59.96789	6
GCTTAGA	3395	59.37376	6
GTTCGCG	310	58.296352	3
GCTAGCC	2260	58.14876	1
CGTATCG	535	58.009583	145
GTTCGAC	1355	57.9313	7
GTATGCG	460	57.41985	5