EGAF00005724892 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005724892
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1193516
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	2387	0.19999731884616545	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	2102	0.17611829250718045	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	1514	0.1268520907972746	No Hit
AACCTGCACGTTTTAATGGAGTAACCGCTATATCCAGGCACATTCCATGA	1447	0.1212384249561799	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	1386	0.11612747545906381	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	1366	0.11445175431246837	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	1264	0.10590557646483163	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	1214	0.10171627359834305	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGATCGT	50	1.8189894E-12	192.71167	145
ACCCGTT	65	0.0	105.38871	7
GTTAGCG	40	7.1431714E-9	102.75399	1
CGGCGAT	80	0.0	94.191154	2
TTACGCG	80	0.0	94.191154	6
TTCGCGC	110	0.0	93.41271	4
GTTCGCG	115	0.0	89.351295	3
GCTAGCC	250	0.0	82.20319	1
CGTCGAC	145	0.0	80.31347	8
CGCGATA	60	1.3005774E-9	79.91977	7
CGCCGTA	35	4.5539033E-5	78.28875	7
CGCGCTT	80	1.8189894E-12	77.06549	9
CCGCGTT	45	1.727476E-6	76.11407	4
CGCACTA	55	6.511982E-8	74.73017	1
TCCCGTA	85	3.6379788E-12	72.53223	9
CTATGCG	110	0.0	68.502655	5
CGAGTTA	90	5.456968E-12	68.502655	7
TCGTCGC	110	0.0	68.502655	4
TCGCGCT	140	0.0	68.502655	5
ACGCGCC	115	0.0	65.524284	8