EGAF00005724894 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005724894
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9154051
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	22214	0.24266851910700518	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	15793	0.17252471064450045	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	13612	0.14869919339536125	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	13240	0.1446354187889056	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	12244	0.13375499000387914	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	12183	0.13308861836142272	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	11713	0.12795427947692228	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	11452	0.12510308277723164	No Hit
GCAAGTGAGTGGTACAAGAGTGCAGACTCACAGTTTAAATTATTCTCTTA	11243	0.12281994059242186	No Hit
AACCTGCACGTTTTAATGGAGTAACCGCTATATCCAGGCACATTCCATGA	9632	0.1052211747564002	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCCGTT	995	116.392525	7
GTTAGCG	430	101.21876	1
ACGCGTA	445	98.70694	145
CGATCGT	310	86.58968	145
GCTAGCC	2825	72.80931	1
CGAACGT	405	72.80011	1
CGCCGTA	350	68.18284	7
CGCACTA	590	67.82044	1
CGGCGAT	575	64.70477	2
GTACCCG	1890	61.656563	5
TCGTGTT	3535	60.96453	4
AGTACCC	7610	58.2067	2
GTTCGCG	425	57.809956	3
TACCCGT	2020	57.342297	6
CTTTCGT	3835	56.9289	1
CGTCGAC	705	56.74916	8
CCCATAA	8375	56.66363	6
ACCCATA	8005	54.984367	5
CGCGATA	520	53.99094	7
AGGTTCG	880	53.447224	5