EGAF00005724898 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005724898
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6113046
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	13744	0.2248306327156707	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	9370	0.15327874189070392	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	9305	0.15221544218708644	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	8896	0.1455248332827857	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	8613	0.14089538995780498	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	7617	0.12460236680698952	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	7576	0.12393167007086156	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	7116	0.11640677986064557	No Hit
AACCTGCACGTTTTAATGGAGTAACCGCTATATCCAGGCACATTCCATGA	6538	0.1069515917269394	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	6402	0.10472684157783207	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGATA	390	83.60935	7
GTTAGCG	235	82.72673	1
ACCCGTT	570	81.54955	7
CGCGCTT	385	77.48709	9
CGATTAG	425	68.614525	1
GCTAGCC	2010	67.35879	1
CGCACTA	480	66.53838	1
TCGTGTT	2060	65.03646	4
CGCGTTC	420	64.45931	5
GTTCGCG	285	63.328453	3
GTATGCG	320	62.909813	5
ACGCGTA	275	62.235634	145
CGTATCG	385	61.55172	145
CGAACGT	270	59.145237	1
CGTCGAC	575	59.122097	8
CGCCGTA	285	58.42356	7
CTTTCGT	2270	58.114357	1
TTACGCG	315	57.29717	6
CCGCGTT	475	56.995136	4
AGTACCC	4710	54.23676	2