EGAF00005724908 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005724908
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6069773
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	12813	0.21109520899710746	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	9032	0.14880292887394636	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	8889	0.1464469923339802	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	7791	0.12835735372640789	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	7489	0.12338187935529055	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	7137	0.11758265094922002	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	6772	0.11156924649406164	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	6747	0.11115736947658504	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	6175	0.10173362331672041	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTTAGCG	275	95.85096	1
ACCCGTT	430	91.87202	7
GTTCGCG	240	83.79079	3
TTACGCG	330	81.95212	6
CGTCGAC	585	71.08406	8
GCTAGCC	1955	69.18842	1
TCGTGTT	2065	68.50458	4
CGCGATA	380	67.48309	7
CGGCGAT	280	64.39042	2
CTTTCGT	2220	64.366486	1
TAGTCCG	320	61.845905	145
CGAACGT	285	60.847218	1
CGATCGT	240	60.471554	145
CGAGTTA	620	60.364124	7
CGATTAG	400	58.960953	1
CGCGCTT	325	57.57809	9
GCGGATA	465	56.747498	145
GCGATTA	250	55.47528	6
TTCGCGC	365	55.095314	4
CCCATAA	4865	54.73409	6