EGAF00005724920 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005724920
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6723829
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	13407	0.199395314782693	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	11785	0.17527215519609435	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	10666	0.15862985212741135	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	9123	0.13568161831599226	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	7980	0.11868237577130532	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	7831	0.1164663765244476	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	7231	0.10754288962434946	No Hit
CTGATTGATGTTTAGCTCTAGACTAAGTTGCTTTCAAGTGATAACTGTCT	6987	0.10391400495164288	No Hit
GCAAGTGAGTGGTACAAGAGTGCAGACTCACAGTTTAAATTATTCTCTTA	6949	0.10334885078130333	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCCGTT	600	120.739716	7
CGATCGT	285	88.37091	145
TTACGCG	335	86.09172	6
GCTAGCC	2425	82.38013	1
CGTCGAC	360	78.14985	8
GTTAGCG	120	70.342186	1
CGAACGT	275	69.06324	1
CGCGATA	485	66.70836	7
CGCCGTA	290	65.483215	7
CTTTCGT	2730	64.15826	1
TCGTGTT	2750	63.177727	4
GTTCGCG	370	60.83377	3
CGCACTA	465	60.50941	1
ACGCGTA	320	59.965973	145
TACCCGT	1265	57.275517	6
CTAGTCG	1400	54.763973	3
TTCGCGC	400	54.513172	4
TTTCGTG	3685	53.6375	2
CCGACGT	640	52.75703	5
GTACCCG	1375	52.181503	5