EGAF00005724932 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005724932
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6438454
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	15272	0.23719979982772263	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	12240	0.19010774946904954	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	9393	0.14588905970284172	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	9131	0.14181975983675585	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	8743	0.135793468432018	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	7828	0.12158198225847386	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	7734	0.12012200444392396	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	7548	0.11723311217258056	No Hit
AACCTGCACGTTTTAATGGAGTAACCGCTATATCCAGGCACATTCCATGA	6792	0.10549116294066867	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTTAGCG	195	119.03158	1
ACCCGTT	535	98.581604	7
CGGCGAT	255	85.50554	2
CGCCGTA	290	80.021065	7
CGCGATA	370	79.82446	7
GCTAGCC	1830	79.176994	1
CGTCGAC	475	68.101395	8
ACGCGTA	340	67.61051	145
CGAACGT	320	65.94079	1
TCGTGTT	2300	65.137024	4
CGATCGT	270	62.73412	145
TTACGCG	225	62.520668	6
CGATTAG	375	61.89642	1
CTTTCGT	2440	59.959274	1
GTTCGCG	235	59.86021	3
AGTACCC	4910	55.43732	2
CGCGCTT	445	55.309505	9
CCCATAA	5400	54.966087	6
CGCACTA	390	54.105263	1
AGGTTCG	525	53.58914	5