EGAF00005724946 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005724946
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6235817
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	14596	0.23406716393377164	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	9743	0.156242558112273	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	8932	0.14323704496138998	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	8804	0.14118438690551696	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	7703	0.12352832034679657	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	7499	0.12025689657024893	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	7184	0.11520543338587391	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	7152	0.11469226887190564	No Hit
AACCTGCACGTTTTAATGGAGTAACCGCTATATCCAGGCACATTCCATGA	6515	0.10447708776572501	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	6340	0.10167071932996108	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGATCGT	215	114.26029	145
ACCCGTT	455	92.37196	7
GTTAGCG	275	91.7745	1
TTACGCG	290	79.75093	6
CGCGTTC	390	77.27226	5
CGTCGAC	715	74.457405	8
TCGTGTT	2195	73.755394	4
CGCCGTA	405	72.643135	7
CGAACGT	235	68.613914	1
GTTCGCG	370	68.19107	3
GCTAGCC	1750	68.10251	1
CGCGATA	335	66.91223	7
ACGCGTA	195	62.98965	145
CTTTCGT	2555	62.559914	1
CGCGCTT	595	61.219555	9
CCGCGTT	470	61.13674	4
CCGACGT	695	59.4959	5
AGTACCC	5075	59.38259	2
CGATTAG	405	58.854015	1
AGCGTGA	1425	58.52641	6