EGAF00005724950 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005724950
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8768708
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	22618	0.25793993824403777	No Hit
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	17985	0.20510433236002384	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	14748	0.16818897379180603	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	12343	0.14076190015678477	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	11488	0.13101131888529075	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	10802	0.12318804549085224	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	10437	0.11902551664395712	No Hit
GCAAGTGAGTGGTACAAGAGTGCAGACTCACAGTTTAAATTATTCTCTTA	9339	0.10650371753740688	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTTAGCG	265	113.62526	1
ACGCGTA	370	111.81559	145
ACCCGTT	925	108.23491	7
CGGCGAT	435	80.4856	2
GCTAGCC	2850	80.34432	1
CGATCGT	280	69.532394	145
CGCGATA	605	67.119026	7
TCGTGTT	3425	66.44468	4
CGAACGT	305	64.285126	1
CTTTCGT	3560	63.533802	1
TTACGCG	300	63.020584	6
GTTCGCG	360	62.24184	3
CTAGTCG	1775	61.935017	3
CGTCGAC	550	61.100414	8
TAGACTC	5710	60.202015	9
CGCCGTA	420	60.010357	7
GCTTAGA	5890	59.085514	6
CGATTAG	450	57.576004	1
TTCGTGT	4000	56.89293	3
GTACCCG	1750	56.418106	5