EGAF00005724956 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005724956
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7395735
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	14086	0.19046112387747804	No Hit
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	14080	0.1903799960382572	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	12624	0.1706929737206647	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	9693	0.1310620242612803	No Hit
CTGATTGATGTTTAGCTCTAGACTAAGTTGCTTTCAAGTGATAACTGTCT	9168	0.1239633383294561	No Hit
CTTTCGTGTTCAAACCACGGAGTTCACAACACAGCAGCACACACAGCCGG	8470	0.11452546636676408	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	8337	0.11272713259736862	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	8228	0.11125331018485654	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	8164	0.11038794656650082	No Hit
GTAATATATTTGGTCTGCGGCCTGTCGATTATACACATCTCCGAGCCCAC	7831	0.10588535148974373	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	7531	0.10182895952870134	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	7401	0.10007118967891629	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCCGTT	740	99.25687	7
GTTAGCG	280	85.00535	1
CGCCGTA	315	82.043015	7
GCTAGCC	2895	80.80647	1
GTTCGCG	375	72.53986	3
CGAACGT	320	68.00429	1
TCGTGTT	2940	66.15606	4
CGTCGAC	630	64.76686	8
TTACGCG	345	63.080273	6
ACGCGTA	465	60.701126	145
CTTTCGT	3235	60.54168	1
CGCGATA	405	60.452747	7
CGATTAG	465	59.960762	1
CGCACTA	615	57.499557	1
TTCGTGT	3470	56.24714	3
CGCGCTT	550	55.640244	9
TTTCGTG	3950	54.920288	2
CCCATAA	5890	54.03725	6
CGTGTTC	3650	53.661438	5
AGTACCC	5620	53.242146	2