EGAF00005724978 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005724978
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6669606
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTAATATATTTGGTCTGCGGCCTGTCGATTATACACATCTCCGAGCCCAC	15982	0.2396243496242507	No Hit
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	11036	0.16546704557960396	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	10869	0.16296314954736457	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	8298	0.1244151453624097	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	8245	0.12362049572343554	No Hit
CTTTCGTGTTCAAACCACGGAGTTCACAACACAGCAGCACACACAGCCGG	7309	0.1095866832313633	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	6895	0.10337942001371594	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	6711	0.10062063636142825	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCCGTT	825	96.207375	7
GTTAGCG	230	69.6145	1
GCTAGCC	1710	65.93362	1
AGCGTGA	1815	65.41268	6
TCGTGTT	2360	64.72005	4
CTAGTCG	1645	64.465935	3
CGAACGT	290	64.413414	1
CGATTAG	340	62.789547	1
CTTTCGT	2415	62.708298	1
GCGTGAT	1910	62.50791	7
GTTCGCG	430	62.042686	3
AGTCGAA	1705	61.80894	5
TAGTCGA	1710	61.62775	4
GTACCCG	1345	59.508305	5
GTAATAT	4475	56.054585	1
CGTCGAC	800	55.026173	8
CGGTATA	585	53.58714	6
TTCGTGT	2865	53.542946	3
AACGATT	875	53.35911	9
CGGAGTG	1890	53.28733	2