EGAF00005725016 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005725016
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4864402
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	11625	0.23898107105457156	No Hit
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	10034	0.20627407027626418	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	7601	0.15625764482458482	No Hit
CTTTCGTGTTCAAACCACGGAGTTCACAACACAGCAGCACACACAGCCGG	6896	0.14176459922514628	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	6341	0.13035518034899254	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	6036	0.12408513934498012	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	5832	0.1198914070013128	No Hit
CTGATTGATGTTTAGCTCTAGACTAAGTTGCTTTCAAGTGATAACTGTCT	5696	0.11709558543886792	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	5694	0.1170544704158908	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	5627	0.11567711714615692	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	5222	0.10735132499328796	No Hit
GCCACTTGATTTCTTTTCCTTTCTCTCTCTACCAATATTAAGCCTTAGTG	5009	0.10297257504622355	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCCGTT	560	114.548004	7
GCTAGCC	2055	89.89032	1
GTTAGCG	140	85.613914	1
TCGTGTT	2205	82.47936	4
CGAACGT	180	82.2565	1
CGTCGAC	405	81.80446	8
CGATCGT	150	79.561676	145
CGTTATA	175	76.533165	9
TTACGCG	260	75.91347	6
CTTTCGT	2395	75.65734	1
GTTCGCG	225	75.18816	3
CGCCGTA	275	71.772736	7
ACGCGTA	170	70.20148	145
CGGCGAT	225	68.923195	2
CGCGTTC	270	65.26951	5
TTCGTGT	2810	64.9702	3
CCGCGTT	290	63.198895	4
TTTCGTG	3200	62.77982	2
TTCGCGC	270	62.65873	4
CGTGTTC	2950	61.649822	5