EGAF00005725020 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005725020
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6175191
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	13935	0.22566103623353514	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	13639	0.2208676622310144	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	9823	0.15907200279311198	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	9542	0.1545215362569352	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	8352	0.1352508772603147	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	7917	0.12820656073634	No Hit
GCCACTTGATTTCTTTTCCTTTCTCTCTCTACCAATATTAAGCCTTAGTG	7821	0.12665195295173864	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	7241	0.11725953091977237	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	7089	0.1147980685941536	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	6949	0.11253093224161002	No Hit
CTTTCGTGTTCAAACCACGGAGTTCACAACACAGCAGCACACACAGCCGG	6646	0.1076242014214621	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCCGTT	740	106.90907	7
GTTAGCG	345	88.494286	1
GCTAGCC	2630	88.11957	1
ACGCGTA	260	87.47926	145
CGATCGT	210	72.20511	145
CGTCGAC	635	71.03526	8
TCGTGTT	2540	68.57191	4
CTTTCGT	2560	68.03233	1
TTACGCG	350	65.42839	6
GTTCGCG	310	62.675682	3
CGCCGTA	365	60.841305	7
CGATTAG	435	60.614426	1
TTCGTGT	2945	59.612583	3
CCCATAA	5155	59.364967	6
TTTCGTG	3185	58.821957	2
AGTCGAA	1570	58.78531	5
CTAGTCG	1565	58.084427	3
AGTACCC	5070	57.070705	2
GTACCCG	1415	56.8877	5
ACCCATA	5215	55.487934	5