EGAF00005725038 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005725038
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8234127
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	15693	0.190584867102487	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	13539	0.16442544546616783	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	11704	0.14214014430430816	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	10816	0.13135575878292866	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	9453	0.11480269857387432	No Hit
CTTTCGTGTTCAAACCACGGAGTTCACAACACAGCAGCACACACAGCCGG	9316	0.113138891348166	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	8898	0.10806245762301211	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	8713	0.1058157106393914	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	8665	0.10523277088147899	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCCGTT	1215	123.59237	7
GTTCGCG	335	89.667465	3
CGCCGTA	415	82.46648	7
CGTCGAC	595	79.822266	8
ACGCGTA	390	79.08761	145
GTTAGCG	215	77.9863	1
GTACCCG	1915	77.702545	5
CGAACGT	305	75.58918	1
TCGTGTT	3015	75.07089	4
CGGCGAT	475	73.53479	2
TACCCGT	2090	70.86295	6
GCTAGCC	2435	68.57163	1
TTACGCG	400	68.11368	6
CTTTCGT	3705	61.471653	1
CGCGATA	520	60.441975	7
AGGTTCG	790	59.24779	5
TTCGTGT	3895	57.93037	3
CGTGTTC	3950	57.302338	5
TTTCGTG	4375	57.00418	2
CGATTAG	520	56.42759	1