EGAF00005725052 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005725052
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6644223
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	15237	0.22932704094970924	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	10255	0.15434460884290008	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	10220	0.15381783543387992	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	9163	0.1379092784814718	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	8794	0.13235558168351666	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	8271	0.12448408188587287	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	7392	0.11125454398505288	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	6946	0.10454194568725343	No Hit
GCAAGTGAGTGGTACAAGAGTGCAGACTCACAGTTTAAATTATTCTCTTA	6849	0.10308203081082618	No Hit
AACCTGCACGTTTTAATGGAGTAACCGCTATATCCAGGCACATTCCATGA	6739	0.10142645723962004	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCCGTT	505	95.418915	7
GTTAGCG	210	94.5005	1
CGTAGCG	120	91.88218	140-144
CGATCGT	255	86.823265	145
CGAACGT	265	80.23628	1
CGCACTA	455	77.88503	1
TTACGCG	280	75.937904	6
CGTCGAC	635	74.767265	8
ACGCGTA	350	73.244896	145
GTTCGCG	385	71.79368	3
CGGCGAT	335	69.81649	2
CGTATCG	535	69.69778	145
TCGTGTT	2015	67.53233	4
CGATTAG	370	67.04428	1
TTCGCGC	425	65.03712	4
AGCGTGA	1490	63.740273	6
GCTAGCC	1905	62.876324	1
CGCGCTT	430	60.97432	9
CGCGACT	525	60.748497	3
AACCGAC	475	58.181465	9