EGAF00005725054 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005725054
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5904864
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	15342	0.25981970118194087	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	10449	0.17695581134468125	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	8910	0.15089255230941814	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	8587	0.14542248559831353	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	8385	0.14200157700499114	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	8024	0.13588797303375658	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	7935	0.134380741029768	No Hit
GCAAGTGAGTGGTACAAGAGTGCAGACTCACAGTTTAAATTATTCTCTTA	7104	0.12030759726218929	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGATCGT	220	114.621475	145
ACCCGTT	470	105.51793	7
GTTCGCG	310	93.72171	3
GTTAGCG	160	88.5822	1
CGCCGTA	305	81.3007	7
CGTCGAC	620	77.70333	8
CGCGATA	315	76.47059	7
CGCGCTT	335	76.13361	9
ACGCGTA	240	71.63842	145
TCGTGTT	1890	71.61384	4
TTCGCGC	410	70.86395	4
CGATTAG	275	69.577286	1
GCGGATA	415	69.04908	145
TCGCGCT	425	68.36346	5
CGGCGAT	210	67.48891	2
CTTTCGT	2045	66.18758	1
CGTATCG	370	65.05543	145
GTATGCG	365	60.186333	5
AGTACCC	4630	59.231358	2
CGTCCTA	465	59.15947	145