EGAF00005725060 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005725060
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7361832
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	17586	0.23888075685508714	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	15408	0.20929572964990237	No Hit
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	15173	0.20610358943263038	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	9458	0.12847345606365373	No Hit
CTTTCGTGTTCAAACCACGGAGTTCACAACACAGCAGCACACACAGCCGG	9197	0.1249281428861729	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	8541	0.11601731742859657	No Hit
GCCACTTGATTTCTTTTCCTTTCTCTCTCTACCAATATTAAGCCTTAGTG	8092	0.10991829207729815	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	7472	0.10149647533385711	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCCGTT	825	108.641365	7
ACGCGTA	295	107.77525	145
CGGTTCG	150	106.27744	140-144
GCTAGCC	3165	90.32836	1
GTTAGCG	235	90.114815	1
CGCCGTA	415	88.43022	7
GTTCGCG	320	83.82214	3
TCGTGTT	3010	77.153305	4
TCGCGCT	360	74.50857	5
CGTCGAC	545	73.812965	8
CTTTCGT	3285	70.69738	1
CGAACGT	230	70.58994	1
CGGCGAT	330	68.44899	2
CGATCGT	260	67.93526	145
TTACGCG	395	67.907	6
TTCGTGT	3720	62.80731	3
CGCGCTT	545	62.158287	9
TTTCGTG	4580	59.79946	2
TACCCGT	1535	58.40142	6
GTACCCG	1535	58.401024	5