EGAF00005725066 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005725066
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7371538
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	16956	0.2300198411783267	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	13216	0.1792841602390166	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	11132	0.15101326208994648	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	9278	0.12586247266174302	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	8728	0.1184013431118445	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	8582	0.11642075235859871	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	7857	0.10658562704282336	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	7479	0.10145779618852946	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTTAGCG	380	124.41004	1
ACCCGTT	750	117.58239	7
CGATCGT	245	91.97367	145
CGCCGTA	440	88.18678	7
CGCGATA	365	85.04589	7
CGTCGAC	500	81.8379	8
GCTAGCC	2670	80.33902	1
CGAACGT	315	76.160995	1
CGCACTA	440	75.37189	1
ACGCGTA	400	71.158585	145
GTTCGCG	300	70.55709	3
TTACGCG	310	68.282906	6
TAAACCG	810	64.45257	7
GTACCCG	1395	63.730713	5
TCGTGTT	2895	63.611485	4
CGGCGAT	375	62.09066	2
CTTTCGT	3110	60.12425	1
TCGCGCT	345	59.310467	5
AACCGAC	885	58.990883	9
CCCATAA	5920	56.73325	6