EGAF00005725076 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005725076
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6505234
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	14575	0.22405035698946418	No Hit
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	13435	0.20652600659714931	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	9045	0.13904188534955084	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	8915	0.1370434945153395	No Hit
CGCAATGACCCCGCACGATTTCATTGAACACTTCCTCTCCAAAATGCCAG	8200	0.1260523449271771	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	8110	0.1246688435804154	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	7903	0.12148679048286348	No Hit
TTTCCCTTCTGGTATCAAAATGCTCCGGAGAGGAGGGACTGTCAGGGGAG	7358	0.1131089212163621	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	7336	0.11277073199826478	No Hit
CTGATTGATGTTTAGCTCTAGACTAAGTTGCTTTCAAGTGATAACTGTCT	6892	0.10594545868757373	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTTAGCG	260	112.70538	1
ACCCGTT	695	102.40649	7
CGCCGTA	405	87.867294	7
CGCGATA	335	81.23289	7
CGTCGAC	575	76.44659	8
GCTAGCC	1920	74.85739	1
GTTCGCG	290	74.58745	3
ACGCGTA	345	72.65358	145
TTACGCG	335	70.81787	6
CGATCGT	280	67.13969	145
TCGTGTT	2210	66.6181	4
CGAACGT	265	60.555088	1
TAGACTC	4055	60.392773	9
CTTTCGT	2460	59.559753	1
GCTTAGA	4150	59.015728	6
CTAGTCG	1190	58.048405	3
GTACCCG	1250	56.37892	5
CTTAGTC	1900	55.086235	5
TTTCGTG	3315	54.723667	2
CCCATAA	5080	54.530006	6