EGAF00005725084 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005725084
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	14944569
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	35383	0.23676159546655376	No Hit
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	26778	0.17918214971606072	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	19236	0.1287156558345711	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	18166	0.12155586420725818	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	17485	0.11699902486314592	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	17044	0.11404812008964595	No Hit
CTGATTGATGTTTAGCTCTAGACTAAGTTGCTTTCAAGTGATAACTGTCT	16692	0.11169274938608133	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	15566	0.10415823969229224	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	14976	0.10021031720620381	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCCGTT	2210	111.96757	7
GTTAGCG	525	95.34179	1
CGTCGAC	1385	80.79986	8
CGATCGT	705	78.667274	145
ACGCGTA	700	75.544106	145
GTACCCG	3340	74.29492	5
CGCCGTA	815	70.78723	7
GTTCGCG	895	67.561646	3
GCTAGCC	4465	66.0168	1
TTACGCG	685	65.95711	6
CGAACGT	510	65.43063	1
TACCCGT	4015	61.8047	6
TCGTGTT	4965	60.89841	4
TAGACTC	9505	59.16096	9
CTAGTCG	3720	59.04024	3
GCTTAGA	9625	58.71224	6
AGTCGAA	3795	57.877888	5
TTCGCGC	1045	57.868057	4
GCGGATA	995	57.035378	145
CGCGACT	1185	56.892807	3