EGAF00005725090 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005725090
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10262149
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	21490	0.20941032916204977	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	18168	0.17703894184346766	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	17585	0.17135787055908075	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	13013	0.12680579866848551	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	12840	0.12511999192371892	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	12390	0.12073494547779418	No Hit
CTTTCGTGTTCAAACCACGGAGTTCACAACACAGCAGCACACACAGCCGG	11857	0.11554110157628779	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	11334	0.11044470315135749	No Hit
AACCTGCACGTTTTAATGGAGTAACCGCTATATCCAGGCACATTCCATGA	11266	0.10978207391063996	No Hit
CTGATTGATGTTTAGCTCTAGACTAAGTTGCTTTCAAGTGATAACTGTCT	10905	0.10626429220624257	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCCGTT	1325	110.64943	7
GTTAGCG	290	96.31372	1
CGCCGTA	645	83.34446	7
GTTCGCG	500	80.99786	3
GCTAGCC	3445	79.65802	1
CGGCGAT	570	75.95007	2
CGATCGT	345	73.29179	145
TTACGCG	525	71.82287	6
TCGTGTT	3720	70.76427	4
CGAACGT	435	69.02483	1
ACGCGTA	440	68.960915	145
CGCGATA	780	68.0244	7
CGTTATA	455	67.51294	9
CTTTCGT	4140	63.418163	1
CGTCGAC	845	61.96525	8
CGATTAG	550	60.94032	1
GTACCCG	2470	59.650166	5
CGCGCTT	750	58.644196	9
TACCCGT	2565	57.441177	6
TTCGTGT	4705	55.504417	3