EGAF00005725104 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005725104
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4650011
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	9831	0.21141885470808564	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	8328	0.1790963505247622	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	7593	0.1632899363033765	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	6395	0.13752655638879135	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	6147	0.13219323567191563	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	5861	0.1260427125871315	No Hit
CTTTCGTGTTCAAACCACGGAGTTCACAACACAGCAGCACACACAGCCGG	5693	0.12242981790795765	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	5571	0.11980616820046232	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	5561	0.11959111494574959	No Hit
CTGATTGATGTTTAGCTCTAGACTAAGTTGCTTTCAAGTGATAACTGTCT	5559	0.11954810429480704	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	5450	0.11720402381843828	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCCGTT	750	114.406906	7
GTTAGCG	80	86.513916	1
GCTAGCC	1635	80.42883	1
CGCCGTA	300	78.424095	7
TCGTGTT	1785	77.14564	4
GTACCCG	1120	76.612595	5
CGTCGAC	385	73.693474	8
ACGCGTA	215	73.13152	145
TTACGCG	265	73.11537	6
TACCCGT	1215	70.622314	6
CTTTCGT	1990	69.55892	1
CCGACGT	640	67.036026	5
CCGCGTT	210	65.903305	4
TTTCGTG	2580	62.49387	2
TTCGTGT	2235	61.91991	3
CGGCGAT	275	60.392044	2
CGCGTTC	225	58.434265	5
CGCGATA	215	57.93298	7
CCCATAA	3650	56.117123	6
AGTCGAA	940	55.211548	5