EGAF00005725116 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005725116
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7697102
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	17451	0.22672169343734824	No Hit
GTAATATATTTGGTCTGCGGCCTGTCGATTATACACATCTCCGAGCCCAC	17203	0.22349970157599575	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	12044	0.15647447571826384	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	11990	0.15577291297425966	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	10959	0.14237826132484668	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	10080	0.13095837888077877	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	9528	0.12378684860873612	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	9302	0.12085067860605199	No Hit
AACCTGCACGTTTTAATGGAGTAACCGCTATATCCAGGCACATTCCATGA	8678	0.11274373134200377	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	8636	0.11219807143000053	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	7849	0.10197344403127308	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTTAGCG	275	99.32694	1
ACCCGTT	1040	97.18057	7
GCTAGCC	2665	80.45856	1
ACGCGTA	360	68.68948	145
TCGTGTT	2935	65.84429	4
CGATCGT	280	63.783096	145
GCGATTA	380	62.8974	6
GTACCCG	1625	62.195164	5
CTTTCGT	3200	59.751366	1
AGCGTGA	1765	58.422546	6
CGCGATA	375	58.273323	7
CGTCGAC	535	57.434162	8
GCGTGAT	1835	55.822113	7
AGTACCC	6300	54.73821	2
CCCATAA	6995	52.619812	6
CTAGTCG	1350	52.60615	3
GAGTACC	6530	52.60107	1
TTCGTGT	3690	52.00163	3
TACCCGT	1955	51.69675	6
GTATGCG	490	51.564865	5