EGAF00005725144 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005725144
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6497768
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	13426	0.20662479793061247	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	11425	0.17582960795153044	No Hit
GTAATATATTTGGTCTGCGGCCTGTCGATTATACACATCTCCGAGCCCAC	10758	0.16556454462516976	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	9849	0.15157512548924493	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	9269	0.1426489834663226	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	8364	0.12872112393055585	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	8247	0.12692050562593185	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	6773	0.1042357929676775	No Hit
GCAAGTGAGTGGTACAAGAGTGCAGACTCACAGTTTAAATTATTCTCTTA	6559	0.10094235435921997	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	6511	0.10020363915732296	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCCGTT	700	0.0	109.93546	7
GTTAGCG	315	0.0	89.42474	1
ACGCGTA	290	0.0	72.90409	145
GCTAGCC	2105	0.0	70.17311	1
CGCGATA	285	0.0	67.504234	7
CGAACGT	265	0.0	67.408066	1
CGTCGAC	475	0.0	66.53477	8
GTTCGCG	275	0.0	59.96203	3
GTACCCG	1345	0.0	58.235844	5
TCGTGTT	2535	0.0	58.00119	4
CGAGTTA	620	0.0	56.51924	7
CTAACGG	530	0.0	55.74343	4
CGGTTCG	95	5.00695E-7	55.653538	140-144
CGCCGTA	310	0.0	55.411022	7
AGCGTGA	1290	0.0	55.39256	6
CGTATCG	530	0.0	54.85001	145
GTGGTAC	3785	0.0	54.453995	9
CCCATAA	5030	0.0	53.40926	6
CTTTCGT	2755	0.0	51.871178	1
GCTTAGA	3745	0.0	51.737457	6