EGAF00005725156 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005725156
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7255583
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	16793	0.23144935424210566	No Hit
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	10692	0.1473623828712317	No Hit
GTAATATATTTGGTCTGCGGCCTGTCGATTATACACATCTCCGAGCCCAC	10071	0.13880345659335716	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	9327	0.12854928404788424	No Hit
AACAGTACCCGTTCCCTTGATGTCTACAATTTCACCTTTCTTATAGATTC	8826	0.12164425656766657	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	8084	0.11141764900215463	No Hit
TTCTACCCCACATCCATTGTCTGAAACTTCAATAAGATCCACTCCATAGT	8039	0.11079743695303326	No Hit
CTGATTGATGTTTAGCTCTAGACTAAGTTGCTTTCAAGTGATAACTGTCT	7689	0.10597356545986726	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	7330	0.10102565155687696	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	7301	0.1006259593474432	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	7289	0.10046056946767751	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCCGTT	2055	121.01456	7
GTACCCG	2605	95.72685	5
TACCCGT	2765	89.93906	6
GTTAGCG	240	80.139336	1
CGTCGAC	775	76.2289	8
CTAGTCG	1675	68.900665	3
CGCGATA	455	67.94257	7
TCGTGTT	2680	64.59437	4
AGTCGAA	1845	62.55295	5
GCGTGAT	1915	62.06092	7
CCCGTTC	4040	61.8932	8
GCTAGCC	2300	60.925808	1
AGCGTGA	1980	60.716644	6
CGTATCG	440	60.601547	145
TTTGGCG	2345	59.69705	145
GCTTAGA	4730	59.691925	6
TAGACTC	4920	57.244354	9
GTTCGCG	410	56.967083	3
AGGTTCG	640	56.889324	5
TAGTCGA	2060	56.023594	4