EGAF00005725158 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005725158
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5968394
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	12546	0.21020730199782386	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	11724	0.1964347527994968	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	9633	0.16140020246652617	No Hit
CTGATTGATGTTTAGCTCTAGACTAAGTTGCTTTCAAGTGATAACTGTCT	9013	0.1510121483266688	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	8642	0.14479607076878637	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	8145	0.13646887253086845	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	7916	0.13263199446953403	No Hit
GCAAGTGAGTGGTACAAGAGTGCAGACTCACAGTTTAAATTATTCTCTTA	6931	0.1161283923279864	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	6902	0.11564249947305758	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	6220	0.10421563991921444	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCCGTT	635	103.42415	7
GTTAGCG	305	90.67635	1
ACGCGTA	295	75.743225	145
GTTCGCG	295	70.30258	3
TTACGCG	345	70.13277	6
GCTAGCC	1815	70.09307	1
CGAACGT	215	67.53281	1
CGCCGTA	370	67.262474	7
CGTCGAC	650	65.940216	8
TCGTGTT	2050	64.072525	4
CCCATAA	5090	60.574398	6
CCGACGT	660	58.6565	5
CTTTCGT	2305	55.792515	1
GCTTAGA	3625	55.495407	6
ACCCATA	5070	55.22289	5
AGTACCC	5100	54.763412	2
TAGACTC	3610	54.577003	9
CGTTATA	500	53.922085	9
CGATTAG	440	53.426926	1
CGCGATA	365	53.031902	7