EGAF00005725160 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005725160
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7358154
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	16836	0.22880738837485598	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	13327	0.18111879691563942	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	13189	0.17924332651912422	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	11570	0.15724052527305082	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	9973	0.1355367120612045	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	9876	0.134218446637567	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	9724	0.13215271112836183	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	8100	0.11008195805632771	No Hit
GCAAGTGAGTGGTACAAGAGTGCAGACTCACAGTTTAAATTATTCTCTTA	7769	0.10558354717772962	No Hit
CTGATTGATGTTTAGCTCTAGACTAAGTTGCTTTCAAGTGATAACTGTCT	7632	0.10372166714640657	No Hit
AACCTGCACGTTTTAATGGAGTAACCGCTATATCCAGGCACATTCCATGA	7437	0.10107154593393941	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCCGTT	1090	116.19819	7
GTTAGCG	240	107.90048	1
GCTAGCC	2490	83.48145	1
CGATCGT	220	78.47628	145
ACGCGTA	290	76.543365	145
TCGTGTT	2900	75.29854	4
CGCGATA	465	73.73784	7
GTTCGCG	335	73.12187	3
TTACGCG	340	72.048996	6
CGAACGT	315	71.10045	1
GTACCCG	1795	70.18494	5
CTTTCGT	3125	70.101494	1
CGATTAG	380	69.98951	1
CGCCGTA	505	69.282875	7
CGTCGAC	515	66.579285	8
TACCCGT	2010	63.026234	6
TTCGTGT	3645	60.291515	3
CTAGGAT	3260	59.390244	145
TTTCGTG	4230	59.06835	2
GCGATTA	215	58.596664	6