EGAF00005725166 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005725166
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6436090
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	13257	0.20597909600394027	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	9948	0.15456589326749626	No Hit
GTAATATATTTGGTCTGCGGCCTGTCGATTATACACATCTCCGAGCCCAC	9337	0.14507255181329037	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	9150	0.1421670610572568	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	8435	0.13105783169595203	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	8282	0.12868061198647004	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	8126	0.12625678012582173	No Hit
CTGATTGATGTTTAGCTCTAGACTAAGTTGCTTTCAAGTGATAACTGTCT	7787	0.12098960704402828	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	7571	0.11763353216005369	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	6718	0.1043801438450985	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCCGTT	945	107.92574	7
GTTAGCG	245	100.59301	1
ACGCGTA	260	95.61292	145
CGTCGAC	440	73.1177	8
GCTAGCC	1990	72.58732	1
GTACCCG	1475	69.14511	5
TCGTGTT	2415	63.77238	4
TACCCGT	1600	63.74315	6
CTTTCGT	2550	60.673576	1
CGATCGT	285	58.150555	145
CCGCGTT	315	56.4976	4
CTAGTCG	1170	56.160244	3
TTCGTGT	2860	53.846825	3
CGGCGAT	285	52.83743	2
TTTCGTG	3385	52.372696	2
CGCGATA	340	52.343773	7
CGCGTTC	340	52.343365	5
CGCCGTA	370	51.79966	7
CGAACGT	280	51.344345	1
AGTACCC	4795	50.10515	2