EGAF00005725180 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005725180
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5491284
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	9127	0.16620885024340393	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	7980	0.1453212035655049	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	6769	0.12326807355073968	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	6280	0.11436305242999634	No Hit
CTTTCGTGTTCAAACCACGGAGTTCACAACACAGCAGCACACACAGCCGG	6220	0.11327041180168426	No Hit
GGACAAAGCAGGAAGATGTGACTGAAATCCTGAAAGGAGCCGGCTCCTGC	5580	0.10161557843302223	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	5530	0.10070504457609551	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	5528	0.10066862322181842	No Hit
AACCTGCACGTTTTAATGGAGTAACCGCTATATCCAGGCACATTCCATGA	5499	0.10014051358480094	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACGCGTA	255	113.00555	145
ACCCGTT	685	106.806885	7
CGATCGT	160	90.05129	145
CGTCGAC	545	81.04973	8
GTTAGCG	205	80.791595	1
GCTAGCC	1775	75.81323	1
TCGTGTT	2145	64.67271	4
GTTCGCG	310	64.56373	3
GTACCCG	1135	64.459366	5
CGCCGTA	335	61.810234	7
CTTTCGT	2300	59.108128	1
CGGCGAT	250	57.971664	2
TAGTCCG	300	56.759605	145
CGCGTAG	280	56.696175	6
CGAACGT	270	56.229954	1
AACGATT	875	56.00035	9
TACCCGT	1335	54.803528	6
TTGCGTC	720	53.68333	7
ATTGCGT	725	53.313103	6
AGCGTGA	1230	52.18693	6