EGAF00005725186 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005725186
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8135909
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	16670	0.20489413045303237	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	15285	0.1878708328719016	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	11252	0.13830046525839954	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	11166	0.1372434229537228	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	9964	0.12246941306742738	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	9892	0.12158444741700036	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	9600	0.11799542005693525	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	9027	0.11095256842228692	No Hit
AACCTGCACGTTTTAATGGAGTAACCGCTATATCCAGGCACATTCCATGA	8726	0.10725292035591844	No Hit
CTGATTGATGTTTAGCTCTAGACTAAGTTGCTTTCAAGTGATAACTGTCT	8540	0.10496675909231531	No Hit
GTAATATATTTGGTCTGCGGCCTGTCGATTATACACATCTCCGAGCCCAC	8247	0.10136544054266093	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTTAGCG	270	104.5417	1
ACCCGTT	850	101.248184	7
CGTCGAC	690	78.82055	8
ACGCGTA	490	75.58604	145
GCTAGCC	2555	70.05706	1
TTACGCG	335	69.87593	6
CGCCGTA	615	69.40851	7
CGATCGT	345	69.013336	145
CGCACTA	730	63.186077	1
CGAACGT	350	62.943573	1
TCGTGTT	3180	62.135944	4
CGTATCG	585	61.05026	145
CTTTCGT	3270	60.633717	1
CGATTAG	515	60.15542	1
GTTCGCG	325	57.19638	3
CTAGTCG	1745	56.81398	3
CCCATAA	6715	56.69864	6
GCTTAGA	4950	56.33046	6
AGTACCC	6220	55.786053	2
TACCCGT	1580	54.904373	6