EGAF00005725188 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005725188
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6344855
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	14155	0.22309414478345052	No Hit
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	11020	0.17368403218040446	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	10938	0.1723916464600058	No Hit
CTTTCGTGTTCAAACCACGGAGTTCACAACACAGCAGCACACACAGCCGG	8341	0.13146084504689234	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	8029	0.12654347498879012	No Hit
CTGATTGATGTTTAGCTCTAGACTAAGTTGCTTTCAAGTGATAACTGTCT	7466	0.1176701437621506	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	7133	0.1124217968732146	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	6825	0.10756747002098552	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACGCGTA	195	117.85796	145
ACCCGTT	845	111.488815	7
TTACGCG	355	91.09665	6
GCTAGCC	2615	88.44289	1
TCGTGTT	2770	87.55855	4
CGTCGAC	530	79.584366	8
GTTAGCG	230	79.46652	1
CGATCGT	195	74.43661	145
CGTGTTC	3330	73.04683	5
TTCGTGT	3390	72.3744	3
CGCGATA	410	72.01926	7
CTTTCGT	3515	69.797325	1
GTTCGCG	285	69.06728	3
TACCCGT	1430	66.36983	6
CGGCGAT	355	65.34834	2
CGAACGT	130	64.889824	1
AGCGTGA	1350	64.57447	6
TTTCGTG	4415	64.327934	2
GTACCCG	1515	63.10965	5
CGCGTTC	245	60.25911	5