EGAF00005725190 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005725190
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7813526
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG	15628	0.2000121328066228	No Hit
GCAGTGCTTAGACTCAGTACCACCTGCCCAGAGCAAATCTGATGGACTGA	13736	0.1757977128379684	No Hit
CTGATTGATGTTTAGCTCTAGACTAAGTTGCTTTCAAGTGATAACTGTCT	10908	0.1396040660772102	No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG	10705	0.13700600727507656	No Hit
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	10226	0.130875612367579	No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC	9992	0.127880805669553	No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC	9412	0.12045778052059979	No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA	8743	0.1118957049608589	No Hit
GCTCTTTTACTTTTGTGACAATTTGTGCTACAAGTGAAGATCCACAGCAG	7861	0.10060758740676105	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACGCGTA	285	112.60872	145
GTTAGCG	315	100.591675	1
ACCCGTT	780	98.033325	7
GTTCGCG	290	71.26191	3
GCTAGCC	2330	70.06598	1
GCGGATA	525	68.77175	145
TCGTGTT	2965	66.91212	4
CGATCGT	320	66.86142	145
CTTTCGT	3015	66.027565	1
CGTCGAC	865	64.503555	8
CGTATCG	915	64.30389	145
CGGCGAT	305	60.979946	2
TTACGCG	260	60.939632	6
CGCCGTA	455	57.533073	7
TTCGTGT	3525	56.477173	3
CGCGACT	655	55.740234	3
CGAACGT	310	55.551155	1
CGATTAG	500	53.729073	1
CCCATAA	5365	53.67251	6
GTACCCG	1425	53.660347	5