FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005725222

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005725222
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15536189
Sequences flagged as poor quality0
Sequence length42
%GC32

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT12825598.255299932306437No Hit
ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT630830.40603908719184606No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT384730.24763473204400385No Hit
TATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT315180.20286828385004843No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT311940.200782830332458No Hit
TCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACC290780.18716301661881174No Hit
TCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT208530.13422210556269623No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)