FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005725226

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005725226
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28499989
Sequences flagged as poor quality0
Sequence length38
%GC32

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT21556407.563652042111315No Hit
ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT776290.27238256127046223No Hit
TATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT437580.15353690136511983No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT434890.15259304135170015No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT373960.1312140857317524No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)