FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005725231

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005725231
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10463024
Sequences flagged as poor quality0
Sequence length16
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAA4595554.392181457291889No Hit
GGGGGGGGGGGGGGGG1809881.729786723226478No Hit
CAAAAAAAAAAAAAAA1774551.6960201945441393No Hit
CCAAAAAAAAAAAAAA798080.7627622759921032No Hit
TAAAAAAAAAAAAAAA517770.49485693619741294No Hit
CTAAAAAAAAAAAAAA334810.3199935315067613No Hit
TCAAAAAAAAAAAAAA304620.29113954053818475No Hit
ACAAAAAAAAAAAAAA287110.27440441692573775No Hit
GAAAAAAAAAAAAAAA209910.20062077655561145No Hit
TCCAAAAAAAAAAAAA189480.18109487276336173No Hit
ATAAAAAAAAAAAAAA180360.17237846343466287No Hit
ACCAAAAAAAAAAAAA169680.1621710893523708No Hit
CCCAAAAAAAAAAAAA149050.1424540362327373No Hit
GCAAAAAAAAAAAAAA128940.12323397136430156No Hit
CTCAAAAAAAAAAAAA123060.1176141811392194No Hit
TTAAAAAAAAAAAAAA119440.11415437831357358No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)