EGAF00005725236 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005725236
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22076734
Sequences flagged as poor quality	0
Sequence length	63
%GC	33

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1449731	6.566782024913649	No Hit
ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	64860	0.29379345694884035	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	46670	0.21139902306201633	No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	40948	0.18548033418348928	No Hit
TATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	36910	0.16718958519860772	No Hit
TCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	26455	0.11983203674963878	No Hit
TCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACCCCAGCACTTAGATATTTTAAA	24099	0.10916016834736515	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCGCTAG	5340	40.880894	57
ACGACGC	865	35.253838	10
CGACGCT	865	33.606464	11
CGGTACG	255	31.293608	7
CACGACG	1015	30.60548	9
GCCGCTA	7190	30.282888	56
GACGCGA	3475	27.474058	44
GCGCCGC	8215	26.400364	54
ATCGCGA	3725	26.24306	19
ACGCGAT	3630	26.143904	45
TCGCGAA	3720	26.12534	20
TGACGCG	3655	25.887108	43
ACGCCGT	425	25.481647	57
CCGCGGC	3810	25.28328	30
CGCGAAG	3850	25.243187	21
CGCGATG	3805	25.241089	46
CGCGGCG	3810	25.208305	31
CATCGCG	3960	24.75751	18
AGCATCG	4040	24.40796	16
GCATCGC	4040	24.337528	17