FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005725241

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005725241
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26455452
Sequences flagged as poor quality0
Sequence length38
%GC23

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG4169261.5759549298193807No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1744840.6595389109208945No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA707110.2672832805880618No Hit
CCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA282450.10676438263084674No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)