FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005725244

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005725244
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26791718
Sequences flagged as poor quality0
Sequence length42
%GC31

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT296409811.06348611164092No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2215300.8268600020349572No Hit
ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1615220.6028803378715766No Hit
TCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACC927010.34600617996949656No Hit
TATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT914140.341202456669632No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT764470.28533817801456407No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT619420.23119831285175518No Hit
AATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT536410.2002148574421394No Hit
TCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT464310.17330355597203584No Hit
TTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT332210.12399727408298342No Hit
TTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT323800.12085824432759407No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)