FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005725247

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005725247
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26294149
Sequences flagged as poor quality0
Sequence length42
%GC20

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3759341.429724917128902No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2564590.9753462642962889No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1630350.6200428848258219No Hit
CCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA835420.3177208739480407No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA349900.13307142969335117No Hit
CTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA284460.10818376361980758No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)