FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005725249

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005725249
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26333011
Sequences flagged as poor quality0
Sequence length42
%GC18

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA16306696.192489723260283No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA6847502.6003482852758464No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG4169061.583206721024041No Hit
CCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3378631.2830397556891615No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1613910.6128847172091334No Hit
CTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1204000.45722078648734854No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1181600.44871435325037456No Hit
TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1111290.4220140264248551No Hit
GCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1015770.38574016469290195No Hit
TCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA791320.3005049441554557No Hit
ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA674360.2560892106109704No Hit
CCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA660060.25065876439272367No Hit
GCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA549570.20870002294838216No Hit
ACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA514110.1952340353330654No Hit
CTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA501770.19054790202305386No Hit
GTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA498990.189492192898108No Hit
CGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA443670.16848434081465274No Hit
ATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA359620.13656622860181086No Hit
TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA343910.1306003327914153No Hit
TGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA311320.11822423193458584No Hit
GGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA308850.11728624576961594No Hit
TCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA304950.11580521498282137No Hit
TTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA284900.10819119773276212No Hit
GTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA279310.10606838693835657No Hit
CCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA277930.10554432989072157No Hit
GGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA275450.10460254621091375No Hit
TGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA268100.10181137280503168No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)