EGAF00005725254 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005725254
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	126341526
Sequences flagged as poor quality	0
Sequence length	63
%GC	33

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6209234	4.914642237264096	No Hit
ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	380940	0.3015160668551684	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	252471	0.19983215969704213	No Hit
TATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	246851	0.19538389935230008	No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	218202	0.17270806116430792	No Hit
TCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACCCCAGCACTTAGATATTTTAAA	159232	0.12603298776049293	No Hit
TCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	140616	0.11129832324488466	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCGCTAG	16775	37.6819	57
GCCGCTA	22580	28.007034	56
GACGCGA	18040	27.583063	44
ATCGCGA	18735	26.98664	19
TCGCGAA	18770	26.951717	20
TGACGCG	18690	26.623802	43
CATCGCG	19315	26.249905	18
ACGCGAT	18975	26.178862	45
CGCGATG	19330	25.933968	46
CGCGAAG	19615	25.819735	21
CGCGGCG	19590	25.488228	31
CCGCGGC	19705	25.484148	30
GCGCCGC	25055	25.149427	54
GCATCGC	20720	24.483538	17
GTTGACG	21075	23.840729	41
AGCATCG	21340	23.825418	16
CGAAGGC	21660	23.42176	23
GCTCATC	151570	23.055292	23
ACGCCGT	2985	23.009464	57
GCGATGT	21890	22.848944	47