FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005725255

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005725255
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences126341526
Sequences flagged as poor quality0
Sequence length16
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAA23896941.8914557039622903No Hit
GGGGGGGGGGGGGGGG21696811.7173142265196322No Hit
CAAAAAAAAAAAAAAA9314220.737225542138853No Hit
CCAAAAAAAAAAAAAA4232560.33500940933703777No Hit
NNNNNNNNNNNNNNNN2455060.19431932459007975No Hit
TAAAAAAAAAAAAAAA2441690.1932610818710548No Hit
ACAAAAAAAAAAAAAA1652100.13076460703822748No Hit
CTAAAAAAAAAAAAAA1637020.12957101689590167No Hit
TCAAAAAAAAAAAAAA1536720.12163221773971607No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)