FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005725256

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005725256
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38105251
Sequences flagged as poor quality0
Sequence length42
%GC34

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT19032954.994836538407791No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1698640.4457758328373168No Hit
ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT694640.18229508578752046No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT445340.11687103176409991No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT440620.11563235733573832No Hit
TATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT404600.10617959188879245No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)